Short chain fatty acids

Key indicators of gut fermentation and metabolic health

This panel provides a quantitative analysis of 7 short-chain fatty acids, including acetate, propionate, and butyrate. As primary products of gut microbiota fiber fermentation, these molecules are key regulators of metabolism, immune function, and intestinal barrier integrity.

Comprehensive metabolic coverage

Our high-sensitivity LC-MS workflow is specifically optimized for the volatile nature of SCFAs, ensuring accurate quantification across diverse biological matrices.

Key features of our service

  • Quantitative Precision: Absolute quantification of 7 major SCFAs.

  • Microbiome Link: Direct measurement of microbial fermentation activity.

  • High Sensitivity: Optimized protocols to capture low-abundance metabolites in biofluids and tissues.

Sample requirements & pricing

To ensure the highest data quality, please adhere to the following minimal required sample amounts

Turnaround Times

Standard Turnaround: Up to 8 weeks

Express Service (+25% fee): 4 weeks

Price per sample

80 EUR - cells, cell extracts and biofluids (plasma/serum/urine)

90 EUR - tissue samples

100 EUR - feces

Minimal required sample amounts

Plasma/Serum - 25 uL

Urine - 250 uL

Cells - 500000

Tissue - 30 mg

Feces - 500 mg

Short Chain Fatty Acids (SCFA) Metabolite list

Short-chain fatty acids panel with database identifiers
Abbreviation Name HMDB PubChem ChEBI KEGG METLIN
C2Acetic acidHMDB000004217615366C000333206
C3Propionic acidHMDB0000237103230768C001633215
iC4Isobutyric acidHMDB0001873659016135C02632106
C4Butyric acidHMDB000003926430772C00246107
iC5Isovaleric acidHMDB00007181043028484C08262109
C5Valeric acidHMDB0000892799117418C00803110
C6Caproic acidHMDB0000535889230776C015855520

Custom Method Development

If your molecule of interest or a specific molecular class is not covered by our existing panels, we offer a Custom Method Development service.

Our team works closely with you to design tailored analytical approach, optimizing sample preparation, chromatographic separation, and mass spectrometry detection for your specific targets. This service ensures reliable, reproducible, and high-sensitivity measurements, enabling you to confidently test your hypothesis. With our custom methods, even challenging or novel molecules can be accurately detected and studied, unlocking new insights into your research.